Fast and sensitive read alignment

Edit Package bowtie2

Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes. Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes.

  • Devel package for openSUSE:Factory
  • Links to openSUSE:Factory / bowtie2
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  • osc -A https://api.opensuse.org checkout science/bowtie2 && cd $_
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Source Files (show merged sources derived from linked package)
Filename Size Changed
bowtie2-2.5.1.tar.gz 0010598627 10.1 MB
bowtie2.changes 0000012021 11.7 KB
bowtie2.spec 0000002941 2.87 KB
simde-0.7.2.tar.gz 0003821158 3.64 MB
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